species:   Drmel
pid:       MI0005877
parent:    dme-mir-1016
paralog:   
locus:     NT_033778.4:14233130-14233187
matures:   ['UUCACCUCUCUCCAUACUUAG', 'AAGUAUAGAGAGGAUGUGAUUG']
srr:       SRR11906542
genome:    /Users/jax/+Genomes/Animal_genomes/Drmel.GCF_000001215.4_Release_6_plus_ISO1_MT_genomic.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Drmel.SRR11906542.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Drmel.SRR11906542.cram NT_033778.4:14233130-14233187

3 out of bounds
5 alignments
5 proper strand
5 stranded perfect matches

************************           ***********************
GUAAGUAUAGAGAGGAUGUGAUUGGUAAAUUCCAAAGUUCACCUCUCUCCAUACUUAG
.(((((((.((((((..((((((((......))))...)))).)))))).))))))).
-------------------------------------UUCACCUCUCUCCAUACUUAG l=21 a=0 c
--AAGUAUAGAGAGGAUGUGAUUG---------------------------------- l=22 a=0 c*
GUAAGUAUAGAGAGGAUGUGAUUG---------------------------------- l=24 a=2 ma
--AAGUAUAGAGAGGAUGUGAUUG---------------------------------- l=22 a=0 ma*

GUAAGUAUAGAGAGGAUGU--------------------------------------- l=19 a=1 
GUAAGUAUAGAGAGGAUGUG-------------------------------------- l=20 a=1 
GUAAGUAUAGAGAGGAUGUGAUUG---------------------------------- l=24 a=2 (ma)
GUAAGUAUAGAGAGGAUGUGAUUGG--------------------------------- l=25 a=1 

mb-00011
ax-1011011
ku-01
ss-101111111110
fn-011
